Whole genome sequencing analysis for cancer genomics and precision medicine.
Hidewaki Nakagawa, Masashi Fujita
https://pubmed.ncbi.nlm.nih.gov/29345757Actively Recruiting
Led by Avera McKennan Hospital & University Health Center · Updated on 2026-03-27
25000
Participants Needed
6
Research Sites
N/A
Total Duration
Researchers are investigating the wide range of molecular features found in people receiving care within a large community healthcare system who are at risk of or diagnosed with cancer. The study aims to understand the genetic factors behind premalignant and malignant conditions across various cancer types and stages. This research helps advance knowledge of cancer biology and supports the discovery of biomarkers linked to clinical outcomes. Participants will undergo comprehensive molecular profiling, including somatic tumor testing from tissue and/or blood samples using next-generation sequencing. Some samples may also receive whole exome or transcriptome sequencing for research purposes. Pharmacogenomic testing will help explore how individuals respond differently to medications, and participants may optionally provide microbiome samples. Participants may also consent to store biological samples in a biobank and allow their de-identified data to be used for future research. During the study, electronic health records will be reviewed both retrospectively and prospectively to connect clinical data with genomic findings. Researchers will measure how many patients undergo molecular profiling, are referred for genetic testing or targeted clinical trials, and have therapy changes based on molecular or pharmacogenomic results. The study spans five years, with long-term follow-up and data collection to support ongoing research and collaboration in cancer studies.
CONDITIONS
Avera Cancer Sequencing and Analytics Protocol (ASAP)
You may qualify if you...
You will not qualify if you...
Complete this quick 3-step screening to check your eligibility
Duration - 2 to 4 weeks
Participants are screened for eligibility to participate in the trial.
1 visit (in-person)
Duration - Up to 5 years
Participants who undergo routine care are observed and data from molecular profiling, genetic testing, and clinical records are collected over time.
Periodic assessments during routine care
Total: 6 locations
1
Avera Cancer Institute - Marshall
Marshall, Minnesota, United States, 56258
Actively Recruiting
2
Avera Cancer Institute - Aberdeen
Aberdeen, South Dakota, United States, 57401
Actively Recruiting
3
Avera Cancer Institute - Mitchell
Mitchell, South Dakota, United States, 57301
Actively Recruiting
4
Avera Cancer Institute - Pierre
Pierre, South Dakota, United States, 57501
Actively Recruiting
5
Avera Cancer Institute
Sioux Falls, South Dakota, United States, 57105
Actively Recruiting
6
Avera Cancer Institute - Yankton
Yankton, South Dakota, United States, 57078
Actively Recruiting
R
Rachel Elsey, PharmD
A
Avera Precision Research Team
Study Type
OBSERVATIONAL
Masking
N/A
Allocation
N/A
Model
N/A
Primary Purpose
N/A
Number of Arms
0
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