Assessment of Changes in Gut Microbiota of Patients With Recurrent Clostridioides Difficile Infection After Fecal Microbiota Transplantation: Prospective Study
Led by Fondazione Policlinico Universitario Agostino Gemelli IRCCS · Updated on 2026-03-19
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What this Trial Is About
Clostridioides difficile infection (CDI) is a common and serious health care-associated infection causing diarrhea, with recurrent CDI (rCDI) leading to increased hospital stays, higher rates of illness and death, and severe complications like sepsis and toxic megacolon. This research aims to study changes in gut microbiota composition in patients with rCDI after fecal microbiota transplantation (FMT) using metagenomics analysis to better understand how FMT works.
The study involves a single-center observational design where patients with rCDI will receive FMT via colonoscopy using frozen feces from healthy donors selected according to established protocols. Stool samples will be collected before the procedure and during follow-up visits at weeks 1, 2, 4, and 12 to analyze microbiome changes. Donor feces preparation and transplantation follow international guidelines with no specific donor-recipient matching.
Participants will be followed for three months after treatment, providing stool samples at each visit for microbiome and meta-transcriptome assessments. Researchers will evaluate both qualitative and quantitative changes in the gut microbiome at various time points, as well as monitor treatment-related adverse events. Data analysis will use statistical tests to compare microbiome characteristics before and after FMT, capturing outcomes up to 90 days post-treatment.
CONDITIONS
Brief Title
Changes in Recipients Gut Microbiota After Fecal Microbiota Transplantation
Who Can Participate
Age: 18Years - 90Years
All Genders
Eligibility Criteria
You may qualify if you...
Recurrent Clostridioides difficile infection
Age between 18 and 90 years old
Ability to provide written informed consent
Ability to comply with scheduled procedures
You will not qualify if you...
Presence of another known gastrointestinal infection besides C. difficile infection
Known active gastrointestinal disorders such as infectious gastroenteritis, coeliac disease, inflammatory bowel disease, irritable bowel syndrome, chronic pancreatitis, or biliary salt diarrhea
Previous colorectal surgery or presence of a cutaneous stoma
Current or recent (within 6 weeks) use of drugs that could alter gut microbiota, such as antimicrobials or probiotics
Decompensated heart failure or heart disease with ejection fraction below 30%
Severe respiratory insufficiency
Psychiatric disorders
Pregnancy or breastfeeding
Inability to provide informed consent
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Your Study Journey
Screening
Duration - 2 to 4 weeks
Participants are screened for eligibility to participate in the trial.
1 visit (in-person)
Treatment
Duration - Single procedure
Participants receive fecal microbiota transplantation (FMT) by colonoscopy using stool from a healthy donor.
1 procedure visit (in-person)
Follow-up
Duration - 3 months
Participants attend follow-up visits where stool samples are collected for microbiome analysis and monitoring of treatment-related adverse events.
Visits at week 1, week 2, week 4, and week 12 after treatment
Comparison of the burdens of hospital-onset, healthcare facility-associated Clostridium difficile Infection and of healthcare-associated infection due to methicillin-resistant Staphylococcus aureus in community hospitals.
Systematic review with meta-analysis: the efficacy of faecal microbiota transplantation for the treatment of recurrent and refractory Clostridium difficile infection.
Randomised clinical trial: faecal microbiota transplantation by colonoscopy vs. vancomycin for the treatment of recurrent Clostridium difficile infection.